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🔍 Choose Your Analysis Model

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Gromacs

Molecular Dynamics

Analyze protein structural changes using molecular dynamics (MD) simulation.

AlphaFold2

Structure Prediction

Predict highly accurate protein 3D structures from amino acid sequences using deep learning.

RFdiffusion-v2

Structure PredictionDesign

Generate new protein backbone structures or perform motif-based design based on deep learning.

ProteinMPNN

Design

Design optimal sequences based on protein 3D structures.

NetSolP

Feature Analysis

Rapidly predict solubility from protein sequence.

TemStaPro

Feature Analysis

Predict thermal stability (Tm) based on protein sequence.

ToxinPred3

Feature Analysis

Predict the toxicity potential of protein or peptide sequences.

ADMET-AI

Property Prediction

Supports ADMET properties and toxicity prediction of compounds.

DLKcat

Feature Analysis

Predict catalytic activity (kcat) from enzyme sequence.

DiffDock

Docking

Predict receptor-ligand complex structures using diffusion models.

Prodigy

Docking

Quantitatively predict binding affinity (ΔG) of protein-protein complexes.

Boltz

Structure Prediction

Design protein and biomolecule complexes with structural and interaction constraints using protein, compound, and CCD combinations.

Chai

Structure Prediction

Predict protein-compound interactions by fusing molecular and protein features through the attention mechanism.

ThermoMPNN

Design

Design optimal protein sequences considering thermal stability.

LigandMPNN

Design

Design optimal sequences for ligand-binding proteins.

Antifold

Design

Simultaneously optimize antibody sequence and 3D structure.

PocketGen

Docking

Explore and generate ligand pockets from protein structures.

Plip

Docking

Automatically analyze protein-ligand complex interactions.

RepairPDB

Design

Improve quality by correcting incorrect parts of protein structures.

GENIE3

Transcriptome Analysis

Infer gene regulatory networks from gene expression data using ensemble tree-based methods.

ImmuneBuilder

Structure Prediction

Model 3D structures of antibody-antigen complexes.

DeepFRI

Feature Analysis

Predict and visualize functions (GO terms) based on protein sequences and structures.

RDKit

Structure Processing

Supports compound property calculations, similarity evaluation, and structural transformation.

Scanpy

Transcriptome Analysis

Analyze and visualize single-cell RNA sequencing data using scalable Python tools.

REINVENT4

Generation

Create or evaluate new compounds using deep learning.

Bioemu

Molecular Dynamics

Simulate complex biological systems using a large-scale biomedical language model.

Dscript

Feature Analysis

AI predicts interaction potential from protein sequence pairs.

RFantibody

Feature Analysis

Protein-Protein Binding Affinity Prediction Tool